Monday, September 9, 2024

Time Event (+)
12:30 - 15:30 Reception & Welcome + Lunch - Welcome, check-in and lunch at La Villa Clythia  
15:30 - 16:40 Technical Session (Salle Descartes) - Chaired by Hervé Turlier (+)  
15:30 - 16:00 › Numerical simulation of active cell surfaces - from pattern formation to cell division - Sebastian Aland, TU Freiberg, HTW Dresden  
16:00 - 16:20 › Nematically-guided morphogenesis - Waleed Mirza, EMBL Barcelona  
16:20 - 16:40 › A hydrodynamic description of actin cortex using a polymerizing active gel theory with nematic and polar order - Ludovic Dumoulin, Université de Genève  
16:40 - 17:10 Coffee break  
17:10 - 18:40 Technical Session (Salle Descartes) - Chaired by Anja Geitmann (+)  
17:10 - 17:40 › Modeling tension development in growing fruits - Gabriella Mosca, Center for Plant Molecular Biology, Tübingen University  
17:40 - 18:00 › Decoupling Active Control and Passive Mechanics in Apical Hook Maintenance - Amir Porat, Sainsbury Laboratory Cambridge University, School of Physics and Astronomy [Tel Aviv]  
18:00 - 18:40 › [Keynote] From neurons and plants to elephant trunks The multiscale mechanics of active filaments - Alain Goriely, University of Oxford  
18:40 - 19:00 Opening notes - Practical information for participants  
19:00 - 20:00 Welcome cocktail - Apéritif provençal  
20:00 - 21:30 Dinner  

Tuesday, September 10, 2024

Time Event (+)
07:30 - 09:00 Breakfast  
09:00 - 10:30 Technical Session (Salle Descartes) - Chaired by Christophe Godin (+)  
09:00 - 09:40 › [Keynote] Modeling cell growth - Anja Geitmann, McGill University  
09:40 - 10:00 › Hydromechanical field theory of plant morphogenesis - Hadrien Oliveri, Max Planck Institute for Plant Breeding Research  
10:00 - 10:30 › Plant morphogenesis across scales - Arezki Boudaoud, École Polytechnique  
10:30 - 11:00 Coffee break  
11:00 - 12:10 Technical Session (Salle Descartes) - Chaired by Arnold Reusken (+)  
11:00 - 11:20 › Bulk-surface evolving FEM setup for the simulation of dendritic spines growth on realistic geometries - Alessandro Contri, Norwegian University of Science and Technology  
11:20 - 11:50 › Shape evolution of fluid deformable surfaces under active geometric forces - Axel Voigt, Institute of Scientific Computing, TU Dresden  
11:50 - 12:10 › A conservative Eulerian finite element method for transport and diffusion in moving domains - Henry Von Wahl, Friedrich-Schiller-University Jena  
12:30 - 15:30 Lunch + Free Time + Discussion  
15:30 - 16:40 Technical Session (Salle Descartes) - Chaired by Sara Zahedi (+)  
15:30 - 16:00 › Navier-Stokes equations on surfaces: Analysis and numerical simulations - Arnold Reusken, IGPM, RWTH Aachen  
16:00 - 16:20 › Cellular systems on curved surfaces - from curvotaxis, coordinated motion and cell-dependent surface deformation - Lea Happel, Institute of Scientific Computing, TU Dresden  
16:20 - 16:40 › Modelling and Simulation of Intracellular Signalling Pathways: Coupling Chemical Processes and Mechanical Properties - Sofie Verhees, Maxwell Institute for Mathematical Sciences  
16:40 - 17:10 Coffee break  
17:10 - 17:40 Technical Session (Salle Descartes) - Chaired by Sara Zahedi (+)  
17:10 - 17:40 › Fluidic two-phase biomembranes: Numerical analysis and computations - Robert Nürnberg, University of Trento  
17:40 - 19:00 Joint discussion around focus topics (Salle Descartes) - Discussion and Q&A about the focus topics of the workshop (Cell/tissue large deformations and growth, Meshing/Remeshing challenges and topology changes, Coupled surface-bulk dynamics, Mechanochemical couplings, Multiscale modelling of morphogenesis and Acceleration techniques).  
19:30 - 21:00 Dinner  

Wednesday, September 11, 2024

Time Event (+)
07:30 - 09:00 Breakfast  
09:00 - 10:30 Technical Session (Salle Descartes) - Chaired by Axel Voigt (+)  
09:00 - 09:40 › [Keynote] Wrinkling and folding dynamics of epithelial shells at multiple scales - Marino Arroyo, Universitat Politecnica de Catalunya  
09:40 - 10:00 › Modeling Stress Fiber Formation and Homeostasis - Valentin Wössner, Institute for Theoretical Physics, Heidelberg University, BioQuant, Heidelberg University  
10:00 - 10:30 › Biomechanical modeling frameworks for morphogenesis: from cells to tissues and back - Roman Vetter, ETH Zürich, Swiss Institute of Bioinformatics (SIB)  
10:30 - 11:00 Coffee break  
11:00 - 12:10 Technical Session (Salle Descartes) - Chaired by Arezki Boudaoud (+)  
11:00 - 11:20 › Simulating plant biomechanics: gaining insights on how plants build efficient and effective morphologies  - Euan Smithers, Sainsbury Laboratory, Cambridge University  
11:20 - 11:50 › Analyzing the components of transport advection fields in auxin dynamics at the shoot apical meristem - Christophe Godin, ENS Lyon, INRIA Lyon  
11:50 - 12:10 › Mechanical disparities in plant tissues for controlled morphogenesis - Loann Collet, IRBV, Department of Biological Sciences, University of Montréal  
12:10 - 12:30 Group picture - At La Villa Clythia  
12:30 - 14:00 Lunch  
14:00 - 17:10 Social activities - Culture, sport and leisure  
17:10 - 17:40 Coffee break  
17:40 - 19:00 Joint discussion around focus topics (Salle Descartes) - Discussion and Q&A about the focus topics of the workshop (Cell/tissue large deformations and growth, Meshing/Remeshing challenges and topology changes, Coupled surface-bulk dynamics, Mechanochemical couplings, Multiscale modelling of morphogenesis and Acceleration techniques).  
19:30 - 21:00 Dinner  

Thursday, September 12, 2024

Time Event (+)
07:30 - 09:00 Breakfast  
09:00 - 10:30 Technical Session (Salle Descartes) - Chaired by Padmini Rangamani (+)  
09:00 - 09:40 › [Keynote] Investigating neurodevelopmental disorders using innovative IGA, dynamic domain expansion, local refinement and deep learning - Jessica Zhang, Carnegie Mellon University  
09:40 - 10:00 › PDE-constrained optimization for parameter identification in chemotaxis equations - Karolína Benková, Maxwell Institute for Mathematical Sciences  
10:00 - 10:30 › A cut finite element method for problems in time-dependent domains - Sara Zahedi, KTH Royal Institute of Technology  
10:30 - 11:00 Coffee break  
11:00 - 12:30 Working groups around focus topics (Salle Descartes) - Parallel session where small groups get the chance to examine together a question of their interest in depth.  
12:30 - 15:30 Lunch + Free time + Discussion  
15:30 - 16:40 Technical Session (Salle Descartes) - Chaired by Jessica Zhang (+)  
15:30 - 16:00 › Simulating mixed dimensional reaction transport systems in realistic cell geometries - Padmini Rangamani, UC San Diego  
16:00 - 16:20 › Boundary geometry controls topological defect transitions that determine lumen nucleation in embryonic development - Pamela Guruciaga, European Molecular Biology Laboratory [Heidelberg]  
16:20 - 16:40 › A viscous active shell theory of the cell cortex - Hudson Borja da Rocha, Massachusetts Institute of Technology  
16:40 - 17:10 Coffee break  
17:10 - 17:30 Technical Session (Salle Descartes) - Chaired by Jessica Zhang (+)  
17:10 - 17:30 › Stress-mediated growth determines division site morphology of E. Coli - Petr Pelech, Faculty of Mathematics and Physics, Charles University  
17:45 - 18:30 Master Students Session (Salle Descartes) - Chaired by Roman Vetter (+)  
17:45 - 18:00 › A 3D vertex model to map contraction patterns to epithelial shape and mechanics - Enrique García-Ortiz, Institute for Bioengineering of Catalonia (IBEC)  
18:00 - 18:15 › A Numerical Stability Study for Homogenized Constraint Mixture Models - Paul Tuch, TU Munchen  
18:15 - 18:30 › Modelling surface-bulk couplings in cell migration with unfitted finite elements - Martina Gatti, Politecnico di Milano, Collège de France  
19:30 - 21:30 Gala dinner - Menu Gala Provençal (subject to changes) 1. Bruschetta with ricotta, fresh tomato and basil 2. Salmon steak with tomato confit and pesto Roasted courgettes with olive oil and pan-fried polenta 3. Cheeseboard 4. Saint-Tropez tart Micka // Vegan option available  

Friday, September 13, 2024

Time Event (+)
07:30 - 09:00 Breakfast  
09:40 - 10:30 Technical Session (Salle Descartes) - Chaired by Marino Arroyo (+)  
09:40 - 10:10 › Combining cell- and tissue-level processes in models of plant development - Brendan Lane, John Innes Centre  
10:10 - 10:30 › Modelling coupled surface-bulk viscous flows in animal cells with unfitted finite elements - Eric Neiva, CIRB, Collège de France, CNRS  
10:30 - 11:00 Coffee break  
11:00 - 12:00 Wrap up & conclusion  
12:30 - 14:30 Lunch + Farewell